C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006O1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000072195-ENSG00000144591 CGP 9606 2:219434846-219506988
GeneTranscriptPositionBiotype
ENSG00000072195 (SPEG)
SPEG complex locus 		ENST00000312358 (SPEG-004) 219434846-219493632 protein_coding
ENST00000396686 (SPEG-010) 219461255-219466655 protein_coding
ENST00000396688 (SPEG-006) 219460766-219466841 protein_coding
ENST00000396689 (SPEG-007) 219461385-219466862 protein_coding
ENST00000396698 (SPEG-014) 219442045-219466860 protein_coding
ENST00000403148 (SPEG-016) 219442016-219444844 nonsense_mediated_decay
ENST00000409595 (SPEG-025) 219445045-219451783 nonsense_mediated_decay
ENST00000412982 (SPEG-021) 219491867-219498244 protein_coding
ENST00000420132 (SPEG-015) 219442049-219444915 nonsense_mediated_decay
ENST00000431523 (SPEG-009) 219442023-219448515 protein_coding
ENST00000435853 (SPEG-013) 219441516-219448171 protein_coding
ENST00000451076 (SPEG-023) 219444657-219448158 protein_coding
ENST00000452101 (SPEG-011) 219442047-219448191 nonsense_mediated_decay
ENST00000462545 (SPEG-005) 219450670-219466861 processed_transcript
ENST00000463218 (SPEG-020) 219451741-219464667 processed_transcript
ENST00000464989 (SPEG-002) 219443674-219466861 retained_intron
ENST00000475104 (SPEG-022) 219497691-219498287 retained_intron
ENST00000475921 (SPEG-012) 219461240-219466861 retained_intron
ENST00000485069 (SPEG-008) 219471662-219474378 retained_intron
ENST00000485813 (SPEG-024) 219445627-219493593 processed_transcript
ENST00000491248 (SPEG-017) 219445580-219448455 processed_transcript
ENST00000496786 (SPEG-019) 219461222-219464654 processed_transcript
ENST00000497065 (SPEG-018) 219445551-219448395 processed_transcript
ENST00000498378 (SPEG-001) 219437275-219466861 processed_transcript
ENST00000617028 (SPEG-201) 219496355-219498287 protein_coding
ENSG00000144591 (GMPPA)
GDP-mannose pyrophosphorylase A 		ENST00000313597 (GMPPA-001) 219498867-219506987 protein_coding
ENST00000341142 (GMPPA-012) 219498915-219506987 protein_coding
ENST00000358215 (GMPPA-003) 219498901-219506988 protein_coding
ENST00000373908 (GMPPA-004) 219498906-219506988 protein_coding
ENST00000373917 (GMPPA-002) 219498888-219506935 protein_coding
ENST00000435316 (GMPPA-008) 219498909-219505555 protein_coding
ENST00000443704 (GMPPA-005) 219498905-219506933 nonsense_mediated_decay
ENST00000455657 (GMPPA-006) 219498907-219504132 protein_coding
ENST00000480034 (GMPPA-011) 219505725-219506694 retained_intron
ENST00000480506 (GMPPA-009) 219498884-219502441 retained_intron
ENST00000481170 (GMPPA-013) 219499775-219506987 retained_intron
ENST00000496536 (GMPPA-010) 219505940-219506422 retained_intron
ENST00000622191 (GMPPA-201) 219499955-219506988 protein_coding
ENSG00000227432 (AC053503.11)
 ENST00000429882 (AC053503.11-001) 219482073-219516877 antisense
ENSG00000268603 (RP11-316O14.1)
 ENST00000601508 (RP11-316O14.1-001) 219497611-219498246 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0006O1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026207-ENSMUSG00000033021 CGP 10090 1:75375297-75443179
GeneTranscriptPositionBiotype
ENSMUSG00000026207 (Speg)
SPEG complex locus 		ENSMUST00000087122 (Speg-001) 75375297-75432320 protein_coding
ENSMUST00000113587 (Speg-014) 75400635-75404562 protein_coding
ENSMUST00000113588 (Speg-013) 75400521-75404370 protein_coding
ENSMUST00000113589 (Speg-008) 75400085-75403990 protein_coding
ENSMUST00000113590 (Speg-002) 75382114-75404563 protein_coding
ENSMUST00000122266 (Speg-009) 75401010-75404207 protein_coding
ENSMUST00000125118 (Speg-007) 75384700-75387948 retained_intron
ENSMUST00000125306 (Speg-012) 75382138-75387895 nonsense_mediated_decay
ENSMUST00000132222 (Speg-004) 75385512-75389104 processed_transcript
ENSMUST00000132228 (Speg-011) 75384828-75391923 nonsense_mediated_decay
ENSMUST00000137868 (Speg-003) 75385610-75432304 protein_coding
ENSMUST00000143679 (Speg-010) 75423510-75427623 retained_intron
ENSMUST00000146705 (Speg-005) 75383556-75384975 processed_transcript
ENSMUST00000148515 (Speg-006) 75382114-75388345 protein_coding
ENSMUST00000187214 (Speg-015) 75382126-75383382 retained_intron
ENSMUSG00000033021 (Gmppa)
GDP-mannose pyrophosphorylase A 		ENSMUST00000037796 (Gmppa-001) 75435930-75443174 protein_coding
ENSMUST00000113584 (Gmppa-002) 75435943-75443173 protein_coding
ENSMUST00000124539 (Gmppa-011) 75442224-75443179 retained_intron
ENSMUST00000131545 (Gmppa-008) 75436087-75441524 protein_coding
ENSMUST00000132291 (Gmppa-009) 75441620-75442932 retained_intron
ENSMUST00000133418 (Gmppa-005) 75435968-75441515 protein_coding
ENSMUST00000135453 (Gmppa-010) 75442166-75443173 retained_intron
ENSMUST00000140287 (Gmppa-007) 75435984-75439399 protein_coding
ENSMUST00000141124 (Gmppa-004) 75436113-75438328 protein_coding
ENSMUST00000143730 (Gmppa-006) 75435967-75440512 protein_coding
ENSMUST00000144874 (Gmppa-012) 75435982-75441609 protein_coding
ENSMUST00000145166 (Gmppa-003) 75435961-75438873 protein_coding
ENSMUST00000188097 (Gmppa-013) 75436942-75442028 nonsense_mediated_decay
ENSMUSG00000086053 (Gm15178)
predicted gene 15178 		ENSMUST00000132100 (Gm15178-001) 75392131-75396363 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006O1_0001ENSG00000072195ENST00000312358ENST00000396686ENST00000396688ENST00000396689ENST00000396698ENST00000412982ENST00000451076ENST00000464989ENST00000485813ENST00000498378ENSG00000144591ENST00000313597ENST00000358215ENST00000373908ENST00000373917ENST00000435316ENST00000443704ENST00000455657ENST00000480506ENST00000481170ENST00000622191ENSG00000227432ENST00000429882ENSG00000268603ENST00000601508CIL_0006O1_0002ENSMUSG00000026207ENSMUST00000087122ENSMUST00000113587ENSMUST00000113588ENSMUST00000113589ENSMUST00000113590ENSMUST00000122266ENSMUST00000137868ENSMUSG00000033021ENSMUST00000037796ENSMUST00000113584ENSMUST00000135453ENSMUST00000144874ENSMUST00000188097ENSMUSG00000086053ENSMUST00000132100
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072195 ENST00000312358 0.561±0.00 N/A N/A N/A 2.872±0.00 N/A 5.198±4.96 0.240±0.00 N/A N/A 21.500±7.22 1.419±1.21 N/A N/A
ENST00000396686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.952±0.00 2.087±0.00 N/A
ENST00000396688 N/A N/A N/A N/A N/A 14.921±0.00 N/A N/A N/A N/A N/A 8.653±0.00 N/A N/A
ENST00000396689 N/A 10.298±0.00 0.206±0.00 3.093±2.17 N/A 27.174±0.00 N/A 1.452±0.00 N/A N/A N/A 12.942±0.00 1.544±0.00 13.105±0.00
ENST00000396698 2.678±0.00 4.186±0.00 N/A 2.544±0.00 N/A N/A N/A 0.687±0.00 N/A 4.057±0.00 N/A N/A 1.966±1.26 N/A
ENST00000403148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412982 N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A
ENST00000420132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451076 N/A N/A 0.438±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.295±0.00 N/A N/A
ENST00000475104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485813 0.333±0.00 1.912±0.00 N/A 2.239±0.00 1.700±0.00 6.185±0.00 8.227±0.00 N/A 0.022±0.00 1.017±0.00 23.961±21.55 1.794±1.52 0.545±0.06 3.994±0.00
ENST00000491248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498378 N/A N/A N/A N/A N/A N/A 0.387±0.00 N/A 0.064±0.00 N/A N/A N/A N/A N/A
ENST00000617028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144591 ENST00000313597 4.082±0.00 9.006±0.00 N/A 2.515±1.48 5.828±0.00 2.136±0.00 0.213±0.00 16.761±0.00 9.243±0.00 N/A 3.741±3.60 10.369±0.00 7.068±0.00 5.852±0.00
ENST00000341142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000358215 2.560±0.00 N/A N/A 1.142±0.00 2.783±0.00 3.408±0.00 1.724±0.00 N/A N/A N/A N/A 4.604±1.32 2.324±0.00 3.771±0.00
ENST00000373908 1.924±0.00 N/A N/A 0.931±0.00 2.475±0.00 1.962±0.00 N/A 15.663±0.00 0.689±0.00 N/A N/A 5.156±0.00 N/A 3.039±0.00
ENST00000373917 N/A N/A N/A N/A 0.611±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435316 N/A N/A 3.375±0.00 N/A N/A N/A N/A 0.774±0.00 1.369±0.00 2.755±0.00 N/A 8.685±4.40 6.488±0.00 N/A
ENST00000443704 1.663±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.448±0.00 N/A N/A
ENST00000455657 N/A N/A N/A N/A N/A N/A N/A N/A 0.609±0.00 N/A N/A 1.242±0.00 N/A N/A
ENST00000480034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.466±0.00 N/A N/A N/A
ENST00000481170 0.387±0.00 N/A 0.118±0.00 0.419±0.00 0.474±0.00 0.401±0.20 N/A N/A 0.064±0.00 0.226±0.00 N/A 0.925±0.04 N/A N/A
ENST00000496536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622191 N/A N/A 0.813±0.00 0.954±0.00 1.555±0.00 1.789±0.00 4.797±0.00 1.591±0.00 31.864±0.00 4.597±3.99 10.238±0.00 7.472±6.62 21.475±13.24 N/A
ENSG00000227432 ENST00000429882 N/A 0.045±0.00 N/A 0.053±0.00 0.860±0.00 0.132±0.00 0.158±0.00 N/A N/A 0.292±0.00 0.166±0.00 0.102±0.00 0.117±0.00 0.222±0.14
ENSG00000268603 ENST00000601508 N/A N/A N/A N/A N/A N/A N/A 0.221±0.00 0.454±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026207 ENSMUST00000087122 0.700±0.14 0.500±0.02 N/A N/A 1.242±0.93 N/A 6.908±0.59 N/A N/A 0.800±0.08 15.453±2.84 N/A N/A 0.042±0.00
ENSMUST00000113587 N/A N/A 28.617±2.14 34.570±0.00 N/A N/A N/A N/A 3.273±1.08 N/A N/A 6.625±0.69 7.062±3.22 0.378±0.00
ENSMUST00000113588 N/A N/A N/A N/A N/A N/A N/A 3.782±0.33 0.999±0.17 N/A N/A N/A N/A N/A
ENSMUST00000113589 N/A N/A N/A N/A N/A N/A N/A 4.817±0.00 3.844±1.54 N/A N/A N/A N/A N/A
ENSMUST00000113590 4.644±2.73 1.529±0.18 6.186±0.00 4.105±1.49 N/A 3.148±0.35 N/A 1.387±0.24 0.074±0.00 N/A N/A 6.009±0.76 1.450±0.31 N/A
ENSMUST00000122266 N/A 11.389±4.69 N/A N/A 4.015±0.00 12.903±3.73 N/A 5.426±1.36 N/A N/A N/A 17.937±2.41 N/A N/A
ENSMUST00000125118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137868 5.131±3.86 1.081±0.28 11.210±1.25 5.011±4.08 2.043±2.11 2.958±0.83 13.974±0.63 1.077±0.21 0.159±0.07 1.483±0.69 27.176±7.69 4.415±2.33 1.087±0.40 0.061±0.04
ENSMUST00000143679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033021 ENSMUST00000037796 11.490±2.79 10.666±1.61 21.213±6.37 13.979±3.48 15.035±5.95 19.037±4.44 7.096±1.37 12.737±1.16 12.685±6.83 10.491±3.77 9.756±1.93 10.452±2.58 15.301±1.33 9.407±6.10
ENSMUST00000113584 5.536±0.00 9.924±1.99 9.418±0.00 8.891±0.90 9.350±1.28 N/A 6.897±1.74 5.555±0.15 4.478±0.79 5.544±0.00 4.952±1.44 13.033±5.18 15.089±7.21 8.857±5.15
ENSMUST00000124539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.773±0.00 N/A
ENSMUST00000140287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144874 16.562±0.00 27.012±3.87 N/A 8.807±0.00 22.532±5.20 N/A N/A N/A N/A 17.638±0.00 N/A 24.432±0.00 16.883±7.43 10.215±5.96
ENSMUST00000145166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188097 N/A 19.307±0.48 N/A N/A N/A 29.080±7.25 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086053 ENSMUST00000132100 0.275±0.14 N/A N/A 0.116±0.04 N/A 0.470±0.00 0.161±0.09 N/A N/A N/A 0.192±0.12 0.097±0.00 0.165±0.14 N/A

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