C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SPEG complex locus | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000125306  |
Speg-012 |
ENSMUSG00000026207 |
10090 | + |
1:75382138-75387895  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000916 | CIL_000916_0002 | VISTA | 1:75047166-75647630 |
| CIL_0006O0 | CIL_0006O0_0002 | CGP | 1:75360329-75432320 |
| CIL_0006O1 | CIL_0006O1_0002 | CGP | 1:75375297-75443179 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001701 | IMP | in utero embryonic development |
| GO:0055013 | IMP | cardiac muscle cell development |
| GO:0060541 | IMP | respiratory system development |
| GO:0072358 | IMP | cardiovascular system development |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000312358
|
SPEG-004 | protein_coding | Homo_sapiens | 0 | 398 |
|
ENST00000396698
|
SPEG-014 | protein_coding | Homo_sapiens | 0 | 398 |
|
ENST00000403148
|
SPEG-016 | nonsense_mediated_decay | Homo_sapiens | 0 | 224 |
|
ENST00000420132
|
SPEG-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 340 |
|
ENST00000431523
|
SPEG-009 | protein_coding | Homo_sapiens | 0 | 628 |
|
ENST00000435853
|
SPEG-013 | protein_coding | Homo_sapiens | 0 | 595 |
|
ENST00000451076
|
SPEG-023 | protein_coding | Homo_sapiens | 1.99965e-42 | 176 |
|
ENST00000452101
|
SPEG-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 660 |
|
ENST00000464989
|
SPEG-002 | retained_intron | Homo_sapiens | 0 | 462 |
|
ENST00000498378
|
SPEG-001 | processed_transcript | Homo_sapiens | 0 | 398 |
