C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide E pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420249 SNRPEP10-001 ENSG00000227002 9606 - 1:223644110-223644383 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastENST00000420249
Transcript ID Adrenal Breast
ENST00000420249 0.040±0.00 6.045±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166915 Snrpe-001 protein_coding Mus_musculus 0 261
ENSMUST00000121967 Gm14284-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000172079 Snrpe-005 nonsense_mediated_decay Mus_musculus 0 228
ENSMUST00000118757 Gm15553-001 processed_pseudogene Mus_musculus 7e-29 130
ENSMUST00000166291 Snrpe-003 protein_coding Mus_musculus 0.0000000002 69

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