C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor A (SII), 1 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420496 TCEA1P2-001 ENSG00000230409 9606 + 3:37275693-37276598 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000420496
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000420496 0.137±0.00 0.369±0.00 0.467±0.00 0.077±0.00 0.894±0.65 0.515±0.42 0.140±0.11 1.510±0.00 0.820±0.00 1.283±1.22 0.434±0.00 0.404±0.49 0.111±0.00 0.275±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081551 Tcea1-001 protein_coding Mus_musculus 0 1275
ENSMUST00000117942 Tcea1-ps1-001 processed_pseudogene Mus_musculus 0 1271
ENSMUST00000165720 Tcea1-002 protein_coding Mus_musculus 0 1194
ENSMUST00000120989 Gm15223-001 processed_pseudogene Mus_musculus 0 941
ENSMUST00000117772 Gm12112-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000155020 Lypla1-005 nonsense_mediated_decay Mus_musculus 0 243

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