C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc fingers and homeoboxes 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103112 Zhx3-001 ENSMUSG00000035877 10090 - 2:160765782-160859631 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103112
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103112 7.768±0.74 8.232±0.86 3.234±0.42 6.112±0.48 4.833±0.64 2.710±0.41 3.947±0.31 10.086±1.03 4.543±3.67 9.168±1.27 2.013±0.31 8.238±1.22 1.749±0.00 4.210±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TO CIL_0008TO_0002 VISTA 2:160151305-160752587
CIL_0009AU CIL_0009AU_0002 VISTA 2:160192291-160794448
CIL_0007XA CIL_0007XA_0002 VISTA 2:160203620-160804635
CIL_0008MI CIL_0008MI_0002 VISTA 2:160213670-160814864
CIL_0008QO CIL_0008QO_0002 VISTA 2:160215694-160817266
CIL_0009AV CIL_0009AV_0002 VISTA 2:160278530-160880585
CIL_0004EC CIL_0004EC_0002 CGP 2:160645888-160775760
CIL_0002I4 CIL_0002I4_0002 CGP 2:160731300-160872998
CIL_0004E6 CIL_0004E6_0002 CGP 2:160748708-160906002

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005938 ISO cell cortex
GO:0006351 IEA transcription, DNA-templated
GO:0030154 IEA cell differentiation
GO:0042803 ISS protein homodimerization activity
GO:0045669 ISS positive regulation of osteoblast differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0046982 ISS protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309060 ZHX3-010 protein_coding Homo_sapiens 0 2926
ENST00000421422 ZHX3-008 protein_coding Homo_sapiens 0 2063
ENST00000432768 ZHX3-011 protein_coding Homo_sapiens 0 2926
ENST00000441102 ZHX3-021 protein_coding Homo_sapiens 0 364
ENST00000540170 ZHX3-201 protein_coding Homo_sapiens 0 2926
ENST00000544979 ZHX3-002 protein_coding Homo_sapiens 0 2636
ENST00000558993 ZHX3-013 protein_coding Homo_sapiens 0 586
ENST00000559234 ZHX3-007 protein_coding Homo_sapiens 0 2926
ENST00000560361 ZHX3-001 protein_coding Homo_sapiens 0 2926
ENST00000560364 ZHX3-006 protein_coding Homo_sapiens 0 586

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