C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, beta 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422257 ITGB7-005 ENSG00000139626 9606 - 12:53191323-53207282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalPlacentaENST00000422257
Transcript ID Adrenal Placenta
ENST00000422257 10.133±0.00 2.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006T6 CIL_0006T6_0001 CGP 12:53157663-53195141
CIL_0006T5 CIL_0006T5_0001 CGP 12:53180700-53207307
CIL_00060L CIL_00060L_0001 CGP 12:53191318-53232980

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001618 IEA virus receptor activity
GO:0003366 IMP cell-matrix adhesion involved in ameboidal cell migration
GO:0004872 IEA receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0007155 TAS cell adhesion
GO:0007160 IEA:IMP cell-matrix adhesion
GO:0007229 IEA:IMP integrin-mediated signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0008305 IEA:TAS integrin complex
GO:0009615 IEA response to virus
GO:0009986 IDA cell surface
GO:0016020 IDA:IEA membrane
GO:0030198 TAS extracellular matrix organization
GO:0034113 IMP heterotypic cell-cell adhesion
GO:0034446 IMP substrate adhesion-dependent cell spreading
GO:0034669 IDA integrin alpha4-beta7 complex
GO:0043113 IMP receptor clustering
GO:0043235 IDA receptor complex
GO:0046872 IEA metal ion binding
GO:0050776 TAS regulation of immune response
GO:0050839 IMP cell adhesion molecule binding
GO:0050901 IMP leukocyte tethering or rolling
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001327 Itgb7-001 protein_coding Mus_musculus 0 2346

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