C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00060L_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000139626-ENSG00000172819 | CGP | 9606 | 12:53191318-53232980  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000139626  (ITGB7)integrin, beta 7 |
ENST00000267082 (ITGB7-004)
|
53191318-53207307 | protein_coding | |
|
ENST00000422257 (ITGB7-005)
|
53191323-53207282 | protein_coding | ||
|
ENST00000542497 (ITGB7-002)
|
53191557-53207281 | nonsense_mediated_decay | ||
|
ENST00000548269 (ITGB7-012)
|
53193677-53194458 | retained_intron | ||
|
ENST00000548706 (ITGB7-009)
|
53192968-53194258 | retained_intron | ||
|
ENST00000549086 (ITGB7-007)
|
53197887-53207254 | protein_coding | ||
|
ENST00000549196 (ITGB7-015)
|
53196101-53197709 | retained_intron | ||
|
ENST00000549462 (ITGB7-001)
|
53196594-53207251 | retained_intron | ||
|
ENST00000550743 (ITGB7-013)
|
53191371-53200443 | protein_coding | ||
|
ENST00000551319 (ITGB7-014)
|
53191323-53192488 | protein_coding | ||
|
ENST00000551887 (ITGB7-008)
|
53195654-53197111 | retained_intron | ||
|
ENST00000552935 (ITGB7-006)
|
53197872-53201300 | protein_coding | ||
|
ENST00000552972 (ITGB7-011)
|
53197591-53207281 | protein_coding | ||
|
ENST00000589179 (ITGB7-016)
|
53196332-53207251 | retained_intron | ||
|
ENSG00000139651 (ZNF740) zinc finger protein 740 |
ENST00000416904 (ZNF740-002)
|
53180700-53195141 | protein_coding | |
|
ENST00000549739 (ZNF740-003)
|
53185385-53186794 | retained_intron | ||
|
ENST00000551514 (ZNF740-004)
|
53187607-53188756 | processed_transcript | ||
|
ENST00000552593 (ZNF740-001)
|
53180704-53186031 | retained_intron | ||
|
ENSG00000172819 (RARG) retinoic acid receptor, gamma |
ENST00000338561 (RARG-004)
|
53211331-53220259 | protein_coding | |
|
ENST00000394426 (RARG-201)
|
53210567-53232256 | protein_coding | ||
|
ENST00000425354 (RARG-001)
|
53210570-53232252 | protein_coding | ||
|
ENST00000543726 (RARG-005)
|
53211393-53220413 | protein_coding | ||
|
ENST00000543762 (RARG-002)
|
53211414-53232232 | processed_transcript | ||
|
ENST00000546377 (RARG-006)
|
53227608-53232222 | processed_transcript | ||
|
ENST00000546717 (RARG-017)
|
53227374-53232214 | protein_coding | ||
|
ENST00000548284 (RARG-015)
|
53215374-53220084 | retained_intron | ||
|
ENST00000548317 (RARG-018)
|
53213940-53215352 | retained_intron | ||
|
ENST00000549859 (RARG-009)
|
53227635-53232188 | processed_transcript | ||
|
ENST00000550265 (RARG-003)
|
53213237-53220377 | retained_intron | ||
|
ENST00000550350 (RARG-008)
|
53227558-53232216 | processed_transcript | ||
|
ENST00000550362 (RARG-012)
|
53227500-53232980 | protein_coding | ||
|
ENST00000550721 (RARG-013)
|
53227556-53232921 | processed_transcript | ||
|
ENST00000551158 (RARG-011)
|
53227448-53232570 | protein_coding | ||
|
ENST00000551501 (RARG-007)
|
53227598-53232231 | processed_transcript | ||
|
ENST00000551580 (RARG-014)
|
53214094-53214857 | retained_intron | ||
|
ENST00000552901 (RARG-010)
|
53231168-53232586 | processed_transcript | ||
| CIL_00060L_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000001281-ENSMUSG00000001288 | CGP | 10090 | 15:102215995-102257517 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000001281 (Itgb7) integrin beta 7 |
ENSMUST00000001327 (Itgb7-001)
|
102215995-102231935 | protein_coding | |
|
ENSMUST00000127014 (Itgb7-002)
|
102224712-102231935 | protein_coding | ||
|
ENSMUSG00000001288 (Rarg) retinoic acid receptor, gamma |
ENSMUST00000043172 (Rarg-001)
|
102234938-102257517 | protein_coding | |
|
ENSMUST00000063339 (Rarg-002)
|
102234940-102246500 | protein_coding | ||
|
ENSMUST00000124224 (Rarg-004)
|
102241943-102245231 | processed_transcript | ||
|
ENSMUST00000130204 (Rarg-005)
|
102241939-102243589 | processed_transcript | ||
|
ENSMUST00000135466 (Rarg-006)
|
102239989-102257349 | protein_coding | ||
|
ENSMUST00000155563 (Rarg-003)
|
102241943-102250346 | processed_transcript | ||
Expression Patterns
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