C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422570 RP11-118F2.2-001 ENSG00000227399 9606 + 9:92006062-92006544 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryTestisENST00000422570
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Testis
ENST00000422570 0.027±0.00 0.056±0.00 0.057±0.00 0.195±0.00 0.312±0.00 0.055±0.00 0.026±0.00 0.025±0.00 0.049±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JG CIL_0002JG_0001 CGP 9:91563091-92115384

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000121662 Gm14053-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 1e-34 150
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 5e-28 128

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