C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13518
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120018 Gm13518-001 ENSMUSG00000082142 10090 + 2:56039853-56040085 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000120018
Transcript ID Testis
ENSMUST00000120018 1.150±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000758 CIL_000758_0002 CGP 2:55435970-57124003
CIL_0008OW CIL_0008OW_0002 VISTA 2:55953983-56555716
CIL_0008TU CIL_0008TU_0002 VISTA 2:55957296-56558347

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 8e-37 159
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 219
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 219
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 219
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 219
ENST00000344386 CC2D2B-001 protein_coding Homo_sapiens 0.000000004 68
ENST00000395517 RPL21P3-001 processed_pseudogene Homo_sapiens 4.06377e-44 182
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 219
ENST00000397467 RPL21P17-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 0 213
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 196
ENST00000407436 RP11-360O19.5-001 processed_pseudogene Homo_sapiens 3e-35 152
ENST00000410012 CC2D2B-002 protein_coding Homo_sapiens 0.000000000000003 88
ENST00000415692 RP11-248J23.5-001 processed_pseudogene Homo_sapiens 2e-37 159
ENST00000416102 AC017079.4-001 processed_pseudogene Homo_sapiens 5e-38 161
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 1e-38 163
ENST00000417077 RP11-339A7.1-001 processed_pseudogene Homo_sapiens 2e-36 156
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 211
ENST00000422509 RP11-405L18.4-001 processed_pseudogene Homo_sapiens 2e-36 156
ENST00000422570 RP11-118F2.2-001 processed_pseudogene Homo_sapiens 1e-34 150
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000424464 CC2D2B-003 protein_coding Homo_sapiens 7e-19 99
ENST00000428586 RPL21P40-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000432935 RP5-1068B5.1-001 processed_pseudogene Homo_sapiens 0.000002 57
ENST00000433493 RP5-859M6.1-001 processed_pseudogene Homo_sapiens 8e-38 161
ENST00000434936 RP11-319C21.1-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000440049 RPL21P2-001 processed_pseudogene Homo_sapiens 6.00036e-42 174
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 9.94922e-44 180
ENST00000443666 RPL21P133-001 processed_pseudogene Homo_sapiens 8e-31 137
ENST00000444831 RPL21P33-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 202
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 202
ENST00000456604 AC013429.4-001 processed_pseudogene Homo_sapiens 3e-25 119
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 207
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 204
ENST00000463605 RPL21P39-001 processed_pseudogene Homo_sapiens 0 202
ENST00000463655 CTC-209L16.1-001 processed_pseudogene Homo_sapiens 3e-25 119
ENST00000465083 RPL21P8-001 processed_pseudogene Homo_sapiens 2e-32 143
ENST00000465295 RP11-30K9.1-001 processed_pseudogene Homo_sapiens 0 207
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 211
ENST00000467293 RP11-59H7.1-001 processed_pseudogene Homo_sapiens 1e-19 100
ENST00000469899 RPL21P18-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000471181 BRCA1-005 protein_coding Homo_sapiens 0.000008 58
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 202
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 207
ENST00000472975 RP11-112N19.2-001 processed_pseudogene Homo_sapiens 0 191
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 2e-18 97
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 5.00264e-43 178
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 196
ENST00000479116 RP11-73B8.1-001 processed_pseudogene Homo_sapiens 2e-36 156
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 2e-37 159
ENST00000480369 RP11-1110J8.1-001 processed_pseudogene Homo_sapiens 3e-35 152
ENST00000480465 RP11-492M23.2-001 processed_pseudogene Homo_sapiens 0 213
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 2.8026e-45 185
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 207
ENST00000484462 RPL21P119-001 processed_pseudogene Homo_sapiens 0 219
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000485217 CTD-2182N23.1-001 processed_pseudogene Homo_sapiens 2e-32 143
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 202
ENST00000486904 RP11-731J8.1-001 processed_pseudogene Homo_sapiens 5.00264e-43 178
ENST00000487382 CTD-2158P22.1-001 processed_pseudogene Homo_sapiens 3e-35 152
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 196
ENST00000490908 RPL21P127-001 processed_pseudogene Homo_sapiens 8.00001e-41 171
ENST00000491732 RPL21P129-001 processed_pseudogene Homo_sapiens 4e-39 165
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 219
ENST00000493462 RP3-522P13.1-001 processed_pseudogene Homo_sapiens 4.06377e-44 182
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 8.00001e-41 171
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 219
ENST00000496412 CTD-2290C23.2-001 processed_pseudogene Homo_sapiens 6.00036e-42 174
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 191
ENST00000497954 RPL21P4-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 8e-36 154
ENST00000524271 CTC-425K20.1-001 processed_pseudogene Homo_sapiens 6e-22 108
ENST00000554662 RPL21P5-001 processed_pseudogene Homo_sapiens 2e-37 159
ENST00000556149 RPL21P9-001 processed_pseudogene Homo_sapiens 1e-19 100
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 6e-37 158
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 202
ENST00000603164 AC005776.1-001 processed_pseudogene Homo_sapiens 4.00001e-41 171

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