C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12934
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119221 Gm12934-001 ENSMUSG00000082888 10090 - 4:126524330-126524672 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverPlacentaENSMUST00000119221
Transcript ID Bladder Brain Breast Heart Kidney Liver Placenta
ENSMUST00000119221 0.175±0.05 0.246±0.07 0.536±0.00 0.197±0.00 0.196±0.01 0.054±0.00 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JU CIL_0002JU_0002 CGP 4:126489541-126593903

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 1.96182e-44 183
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 1.96182e-44 183
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000344386 CC2D2B-001 protein_coding Homo_sapiens 0.000000001 69
ENST00000395517 RPL21P3-001 processed_pseudogene Homo_sapiens 5e-33 145
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000397467 RPL21P17-001 processed_pseudogene Homo_sapiens 1e-29 134
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000402896 RPL21P67-001 processed_pseudogene Homo_sapiens 0.000000000000003 86
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 1e-38 163
ENST00000407436 RP11-360O19.5-001 processed_pseudogene Homo_sapiens 1e-38 163
ENST00000410012 CC2D2B-002 protein_coding Homo_sapiens 0.000000000007 77
ENST00000411449 RPL21P107-001 processed_pseudogene Homo_sapiens 8e-26 121
ENST00000415692 RP11-248J23.5-001 processed_pseudogene Homo_sapiens 8e-31 137
ENST00000417077 RP11-339A7.1-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 2e-36 156
ENST00000422509 RP11-405L18.4-001 processed_pseudogene Homo_sapiens 5e-23 111
ENST00000422570 RP11-118F2.2-001 processed_pseudogene Homo_sapiens 5e-28 128
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 1e-38 163
ENST00000424464 CC2D2B-003 protein_coding Homo_sapiens 0.0000000000002 81
ENST00000426566 RPL21P66-001 processed_pseudogene Homo_sapiens 8e-16 88
ENST00000428586 RPL21P40-001 processed_pseudogene Homo_sapiens 8e-21 104
ENST00000434936 RP11-319C21.1-001 processed_pseudogene Homo_sapiens 0.0000002 60
ENST00000440049 RPL21P2-001 processed_pseudogene Homo_sapiens 1e-28 130
ENST00000444831 RPL21P33-001 processed_pseudogene Homo_sapiens 6e-22 108
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000456604 AC013429.4-001 processed_pseudogene Homo_sapiens 2e-17 94
ENST00000460347 RPL21P122-001 transcribed_processed_pseudogene Homo_sapiens 2e-26 122
ENST00000460608 CTD-2301A4.3-001 processed_pseudogene Homo_sapiens 3e-30 135
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 7e-38 161
ENST00000464143 RPL21P104-001 processed_pseudogene Homo_sapiens 2e-21 106
ENST00000465083 RPL21P8-001 processed_pseudogene Homo_sapiens 7e-17 92
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 1e-30 137
ENST00000467293 RP11-59H7.1-001 processed_pseudogene Homo_sapiens 0.0000002 60
ENST00000469899 RPL21P18-001 processed_pseudogene Homo_sapiens 1e-28 130
ENST00000471181 BRCA1-005 protein_coding Homo_sapiens 0.0000006 62
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 0.00000000000004 82
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 6e-37 158
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 8e-36 154
ENST00000479116 RP11-73B8.1-001 processed_pseudogene Homo_sapiens 5e-33 145
ENST00000480369 RP11-1110J8.1-001 processed_pseudogene Homo_sapiens 6e-17 92
ENST00000480465 RP11-492M23.2-001 processed_pseudogene Homo_sapiens 1.99965e-42 176
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 5.00264e-43 178
ENST00000484462 RPL21P119-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000486904 RP11-731J8.1-001 processed_pseudogene Homo_sapiens 3e-25 119
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000490908 RPL21P127-001 processed_pseudogene Homo_sapiens 8e-26 121
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 8.40779e-45 183
ENST00000493462 RP3-522P13.1-001 processed_pseudogene Homo_sapiens 4e-39 165
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 2e-32 143
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000497954 RPL21P4-001 processed_pseudogene Homo_sapiens 3e-30 135
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 2e-26 122
ENST00000524271 CTC-425K20.1-001 processed_pseudogene Homo_sapiens 0.000000004 66
ENST00000554662 RPL21P5-001 processed_pseudogene Homo_sapiens 3e-20 102
ENST00000556149 RPL21P9-001 processed_pseudogene Homo_sapiens 0.0000000003 69
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 4e-24 115
ENST00000578024 RPL21P122-002 processed_transcript Homo_sapiens 2e-26 122
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 1e-34 150
ENST00000603164 AC005776.1-001 processed_pseudogene Homo_sapiens 6e-16 88

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