C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: supervillin pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422642 SVILP1-001 ENSG00000234814 9606 + 10:30671566-30717266 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000422642
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000422642 0.188±0.00 0.505±0.00 0.034±0.00 0.265±0.00 1.556±0.00 0.308±0.24 0.118±0.00 0.365±0.33 0.456±0.00 0.467±0.49 0.145±0.07 0.185±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125512 Svil-012 nonsense_mediated_decay Mus_musculus 0 1637
ENSMUST00000025079 Svil-201 protein_coding Mus_musculus 0 1631
ENSMUST00000127297 Svil-013 protein_coding Mus_musculus 0 1631
ENSMUST00000143254 Svil-002 protein_coding Mus_musculus 0 1631
ENSMUST00000140448 Svil-008 protein_coding Mus_musculus 0 1631
ENSMUST00000131609 Svil-005 nonsense_mediated_decay Mus_musculus 0 1631
ENSMUST00000126977 Svil-001 protein_coding Mus_musculus 0 1631
ENSMUST00000129543 Svil-006 retained_intron Mus_musculus 0 610
ENSMUST00000146723 Svil-010 protein_coding Mus_musculus 0 294

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