C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 2 (ARID, RFX-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422737 ARID2-002 ENSG00000189079 9606 + 12:45729916-45893918 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000422737
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000422737 0.634±0.00 0.704±0.00 0.690±0.36 0.828±0.00 0.790±0.08 0.893±0.00 2.043±0.00 0.495±0.00 1.193±0.74 0.537±0.00 2.555±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R9 CIL_0006R9_0001 CGP 12:45729665-45992120

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005488 IEA binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096250 Arid2-001 protein_coding Mus_musculus 0 6312
ENSMUST00000134985 Arid2-002 protein_coding Mus_musculus 0 573
ENSMUST00000176739 Arid2-003 retained_intron Mus_musculus 0 525

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