C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006R9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000189079-ENSG00000139218 CGP 9606 12:45729665-45992120
GeneTranscriptPositionBiotype
ENSG00000189079 (ARID2)
AT rich interactive domain 2 (ARID, RFX-like) 		ENST00000334344 (ARID2-001) 45729665-45908040 protein_coding
ENST00000422737 (ARID2-002) 45729916-45893918 protein_coding
ENST00000426776 (ARID2-008) 45729886-45776329 processed_transcript
ENST00000427628 (ARID2-007) 45729873-45756005 processed_transcript
ENST00000444670 (ARID2-003) 45837395-45908040 protein_coding
ENST00000457135 (ARID2-006) 45852295-45908040 protein_coding
ENST00000477947 (ARID2-009) 45892043-45893888 protein_coding
ENST00000479608 (ARID2-004) 45836761-45908040 processed_transcript
ENST00000480128 (ARID2-005) 45836945-45842234 retained_intron
ENSG00000265093 (RN7SL246P)
RNA, 7SL, cytoplasmic 246, pseudogene 		ENST00000584467 (RN7SL246P-201) 45874035-45874330 misc_RNA
ENSG00000270429 (KNOP1P2)
lysine-rich nucleolar protein 1 pseudogene 2 		ENST00000605379 (KNOP1P2-001) 45880950-45882266 processed_pseudogene
ENSG00000278475 (RP11-19E18.2)
 ENST00000615731 (RP11-19E18.2-001) 45789189-45789657 sense_intronic
CIL_0006R9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033237-ENSMUSG00000033228 CGP 10090 15:96287518-96460843
GeneTranscriptPositionBiotype
ENSMUSG00000033228 (Scaf11)
SR-related CTD-associated factor 11 		ENSMUST00000047835 (Scaf11-201) 96411698-96460843 protein_coding
ENSMUSG00000033237 (Arid2)
AT rich interactive domain 2 (ARID, RFX-like) 		ENSMUST00000096250 (Arid2-001) 96287573-96404992 protein_coding
ENSMUST00000134985 (Arid2-002) 96287518-96352038 protein_coding
ENSMUST00000175735 (Arid2-004) 96356840-96359783 retained_intron
ENSMUST00000176739 (Arid2-003) 96372761-96403601 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006R9_0001ENSG00000189079ENST00000334344ENST00000422737ENST00000426776ENST00000427628ENST00000444670ENST00000457135ENST00000477947ENST00000479608ENST00000480128ENSG00000265093ENST00000584467ENSG00000270429ENST00000605379ENSG00000278475ENST00000615731CIL_0006R9_0002ENSMUSG00000033228ENSMUST00000047835ENSMUSG00000033237ENSMUST00000096250ENSMUST00000134985ENSMUST00000175735ENSMUST00000176739
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006R9_0001ENSG00000189079ENST00000334344ENST00000422737ENST00000444670ENST00000457135ENST00000480128ENSG00000265093ENST00000584467ENSG00000270429ENST00000605379ENSG00000278475ENST00000615731CIL_0006R9_0002ENSMUSG00000033228ENSMUST00000047835ENSMUSG00000033237ENSMUST00000096250
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000189079 ENST00000334344 1.686±0.00 0.463±0.00 2.665±0.00 0.638±0.37 2.015±1.35 2.233±1.19 1.158±0.00 0.734±0.38 1.911±1.72 2.839±1.70 0.736±0.24 1.875±1.27 0.739±0.08 2.306±0.00
ENST00000422737 0.634±0.00 0.704±0.00 N/A 0.690±0.36 0.828±0.00 N/A 0.790±0.08 0.893±0.00 2.043±0.00 N/A 0.495±0.00 1.193±0.74 0.537±0.00 2.555±0.00
ENST00000426776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444670 0.569±0.00 0.393±0.00 N/A 0.312±0.02 N/A 0.700±0.35 N/A 0.651±0.00 0.321±0.00 0.890±0.46 0.237±0.00 1.172±0.52 0.768±0.49 4.092±2.31
ENST00000457135 N/A 0.933±0.00 N/A N/A 0.973±0.00 0.781±0.00 N/A 1.021±0.00 0.394±0.00 0.943±0.00 N/A 0.932±0.45 0.539±0.00 3.105±0.04
ENST00000477947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480128 N/A N/A 3.225±0.00 N/A 4.398±0.00 N/A N/A 1.809±0.00 3.447±0.00 N/A 1.036±0.00 N/A N/A N/A
ENSG00000265093 ENST00000584467 N/A 0.114±0.00 N/A N/A 0.774±0.00 N/A N/A 0.057±0.00 N/A N/A N/A 0.787±0.15 N/A 0.125±0.00
ENSG00000270429 ENST00000605379 N/A 0.046±0.00 0.540±0.00 0.097±0.00 0.059±0.02 N/A 0.021±0.01 N/A N/A 0.203±0.00 N/A 0.011±0.00 0.011±0.00 0.064±0.00
ENSG00000278475 ENST00000615731 0.117±0.00 0.221±0.00 N/A N/A N/A 0.602±0.00 0.034±0.00 N/A 0.103±0.00 N/A N/A 0.290±0.23 N/A 0.117±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033228 ENSMUST00000047835 3.471±3.08 18.821±3.38 7.421±2.06 4.892±2.06 8.667±5.44 8.361±2.49 1.584±0.70 7.126±2.02 6.837±3.45 7.577±1.66 2.719±0.86 17.104±6.41 12.242±4.88 0.584±0.28
ENSMUSG00000033237 ENSMUST00000096250 9.536±3.82 13.218±1.64 6.421±0.42 8.672±4.77 8.989±3.87 8.669±2.01 2.737±0.96 4.795±2.08 4.597±2.96 9.287±2.36 2.019±0.25 19.109±8.13 5.919±1.80 30.084±16.32
ENSMUST00000134985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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