C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422835 SPATA5-002 ENSG00000145375 9606 + 4:122923101-123102293 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryENST00000422835
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000422835 1.208±0.00 1.466±0.00 0.472±0.00 2.468±0.00 2.579±0.00 1.502±0.00 1.587±0.00 2.345±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YK CIL_0006YK_0002 CGP 4:122888697-123319450
CIL_0007AG CIL_0007AG_0001 CGP 4:122923074-123403760

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108112 Spata5-001 protein_coding Mus_musculus 0 2488
ENSMUST00000029277 Spata5-002 protein_coding Mus_musculus 0 2475
ENSMUST00000124347 Spata5-005 processed_transcript Mus_musculus 0 654
ENSMUST00000130674 Spata5-007 processed_transcript Mus_musculus 0 499
ENSMUST00000142199 Spata5-006 retained_intron Mus_musculus 0 355

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