C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029277 Spata5-002 ENSMUSG00000027722 10090 + 3:37420298-37579096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaTestisENSMUST00000029277
Transcript ID Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000029277 3.213±1.75 1.804±0.73 1.522±0.22 4.796±0.02 7.018±5.09 19.664±15.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V2 CIL_0007V2_0002 VISTA 3:37371698-37974083
CIL_0006YK CIL_0006YK_0003 CGP 3:37404910-37579096
CIL_0007AG CIL_0007AG_0002 CGP 3:37419896-37644598

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274008 SPATA5-001 protein_coding Homo_sapiens 0 2811
ENST00000422835 SPATA5-002 processed_transcript Homo_sapiens 0 2475

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