C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: shisa family member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423335 SHISA9-002 ENSG00000237515 9606 + 16:12901757-12911650 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalLungMuscleOvaryENST00000423335
Transcript ID Adipose Adrenal Lung Muscle Ovary
ENST00000423335 0.021±0.00 0.088±0.00 0.040±0.00 0.038±0.00 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DX CIL_0007DX_0001 CGP 16:12901620-13952345

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008328 ISS ionotropic glutamate receptor complex
GO:0030054 IEA cell junction
GO:0032591 ISS dendritic spine membrane
GO:0045202 ISS synapse
GO:0048172 ISS regulation of short-term neuronal synaptic plasticity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182889 Shisa9-003 processed_transcript Mus_musculus 0 1142
ENSMUST00000023138 Shisa9-001 protein_coding Mus_musculus 0 819
ENSMUST00000170672 Shisa9-002 protein_coding Mus_musculus 0 819
ENSMUST00000182154 Shisa9-004 processed_transcript Mus_musculus 0 691

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