C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain PHD finger transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424123 BPTF-001 ENSG00000171634 9606 + 17:67826142-67982288 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyMuscleOvaryPlacentaTestisENST00000424123
Transcript ID Bladder Brain Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000424123 1.494±0.00 2.449±0.53 0.796±0.00 0.800±0.19 1.394±0.00 0.646±0.00 2.193±0.99 1.764±1.16 3.212±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0007010 IEA cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0015630 IDA microtubule cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057892 Bptf-201 protein_coding Mus_musculus 0 4255
ENSMUST00000106762 Bptf-002 protein_coding Mus_musculus 0 3315
ENSMUST00000106763 Bptf-001 protein_coding Mus_musculus 0 3315
ENSMUST00000149486 Bptf-003 protein_coding Mus_musculus 0 540
ENSMUST00000147816 Bptf-006 processed_transcript Mus_musculus 0 453
ENSMUST00000138443 Bptf-005 processed_transcript Mus_musculus 0 394
ENSDART00000109601 bptf-201 protein_coding Danio_rerio 0 248
ENSDART00000154200 bptf-001 protein_coding Danio_rerio 0 248

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