C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: topoisomerase (DNA) II beta 180kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424225 TOP2B-002 ENSG00000077097 9606 - 3:25615473-25664907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleOvaryENST00000424225
Transcript ID Heart Muscle Ovary
ENST00000424225 1.922±0.00 0.986±0.00 4.606±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003918 IEA DNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006265 IEA DNA topological change
GO:0008301 IEA DNA binding, bending

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017629 Top2b-001 protein_coding Mus_musculus 0 4957
ENSDART00000029024 top2b-201 protein_coding Danio_rerio 0 1781
ENSDART00000130695 top2b-001 protein_coding Danio_rerio 0 1781
ENSMUST00000068031 Top2a-001 protein_coding Mus_musculus 0 1467
ENSMUST00000159302 Top2b-004 nonsense_mediated_decay Mus_musculus 0 723
ENSMUST00000160501 Top2b-003 protein_coding Mus_musculus 0 623
ENSMUST00000159987 Top2b-002 retained_intron Mus_musculus 0 595
ENSMUST00000161693 Top2b-006 protein_coding Mus_musculus 0 394

Loading