C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tropomyosin 3 pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424846 TPM3P9-002 ENSG00000241015 9606 + 19:53431984-53444670 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000424846
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000424846 0.918±0.00 2.956±0.00 0.774±0.41 1.044±0.00 1.313±0.72 0.480±0.00 1.604±0.72 0.622±0.00 1.508±0.00 1.387±0.51 1.191±0.19 0.912±0.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072359 Tpm3-rs7-201 protein_coding Mus_musculus 0 1083
ENSMUST00000029549 Tpm3-003 protein_coding Mus_musculus 0 1079
ENSMUST00000062193 Tpm3-201 protein_coding Mus_musculus 0 933
ENSMUST00000119570 Tpm3-001 protein_coding Mus_musculus 0 933
ENSMUST00000118566 Tpm3-004 protein_coding Mus_musculus 0 669
ENSMUST00000119158 Tpm3-005 protein_coding Mus_musculus 0 656
ENSMUST00000121503 Tpm3-002 protein_coding Mus_musculus 0 523
ENSMUST00000131354 Tpm3-006 retained_intron Mus_musculus 0 520
ENSMUST00000147430 Tpm3-011 retained_intron Mus_musculus 0 520
ENSMUST00000149432 Tpm3-007 protein_coding Mus_musculus 0 375
ENSMUST00000116350 Tpm3-rs2-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000133361 Tpm3-013 retained_intron Mus_musculus 0 350
ENSMUST00000133281 Tpm3-010 retained_intron Mus_musculus 0 350
ENSMUST00000149734 Tpm3-014 retained_intron Mus_musculus 0 250
ENSMUST00000149115 Tpm3-009 retained_intron Mus_musculus 0 250
ENSMUST00000151798 Tpm3-012 retained_intron Mus_musculus 0 224
ENSMUST00000127955 Tpm3-008 protein_coding Mus_musculus 5e-40 171

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