C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tropomyosin 3, related sequence 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116350 Tpm3-rs2-001 ENSMUSG00000080175 10090 - 4:27996583-27996905 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000116350
Transcript ID Placenta
ENSMUST00000116350 0.178±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000142717 tpm4a-001 protein_coding Danio_rerio 2e-25 121
ENSDART00000138978 tpm4a-002 protein_coding Danio_rerio 1e-26 124
ENSDART00000036075 tpm4a-202 protein_coding Danio_rerio 3e-25 121
ENSDART00000123125 tpm4a-203 protein_coding Danio_rerio 3e-25 121
ENSDART00000009054 tpm4a-201 protein_coding Danio_rerio 2e-26 124
ENST00000391998 TPM3P6-001 processed_pseudogene Homo_sapiens 0 348
ENST00000413233 TPM3P1-001 processed_pseudogene Homo_sapiens 0 300
ENST00000424846 TPM3P9-002 processed_transcript Homo_sapiens 0 370
ENST00000425942 TPM3P4-001 processed_pseudogene Homo_sapiens 0 326
ENST00000492121 TPM3P9-001 transcribed_processed_pseudogene Homo_sapiens 0 370
ENST00000561804 RP11-618N24.1-001 processed_pseudogene Homo_sapiens 0 272

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