C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sec61 alpha 1 subunit (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424880 SEC61A1-003 ENSG00000058262 9606 + 3:128052759-128071677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLungOvaryPlacentaTestisENST00000424880
Transcript ID Bladder Breast Colon Lung Ovary Placenta Testis
ENST00000424880 2.196±0.00 3.945±0.00 7.404±0.00 7.285±0.00 24.833±0.00 31.073±0.00 10.864±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032168 Sec61a1-001 protein_coding Mus_musculus 0 1502
ENSMUST00000145421 Sec61a1-002 retained_intron Mus_musculus 0 1053
ENSDART00000049425 sec61al2-001 protein_coding Danio_rerio 0 828
ENSMUST00000136103 Sec61a1-009 processed_transcript Mus_musculus 0 446
ENSMUST00000139676 Sec61a1-003 retained_intron Mus_musculus 4e-31 141

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