C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Sec61 alpha 1 subunit (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145421 Sec61a1-002 ENSMUSG00000030082 10090 - 6:88506329-88513901 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastENSMUST00000145421
Transcript ID Brain Breast
ENSMUST00000145421 1.269±0.00 6.273±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000049425 sec61al2-001 protein_coding Danio_rerio 0 628
ENST00000243253 SEC61A1-001 protein_coding Homo_sapiens 0 1051
ENST00000298428 SEC61A2-009 protein_coding Homo_sapiens 0 564
ENST00000304267 SEC61A2-008 protein_coding Homo_sapiens 0 564
ENST00000379033 SEC61A2-201 protein_coding Homo_sapiens 0 564
ENST00000418772 SEC61A2-004 protein_coding Homo_sapiens 3e-34 148
ENST00000424880 SEC61A1-003 protein_coding Homo_sapiens 0 1053
ENST00000464451 SEC61A1-002 protein_coding Homo_sapiens 0 1051
ENST00000466451 SEC61A2-013 processed_transcript Homo_sapiens 0 202
ENST00000472221 SEC61A2-012 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000475268 SEC61A2-006 nonsense_mediated_decay Homo_sapiens 0 564
ENST00000483956 SEC61A1-004 processed_transcript Homo_sapiens 0 497
ENST00000495368 SEC61A2-007 processed_transcript Homo_sapiens 0 564

Loading