C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tubulin, gamma complex associated protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425018 TUBGCP6-006 ENSG00000128159 9606 - 22:50217694-50220416 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverLungMuscleENST00000425018
Transcript ID Colon Kidney Liver Lung Muscle
ENST00000425018 2.514±0.00 1.289±0.00 1.343±0.00 5.747±0.00 2.577±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000097 CIL_000097_0001 CGP 22:50200979-50244992
CIL_000096 CIL_000096_0001 CGP 22:50217689-50251405

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000922 IEA spindle pole
GO:0005815 IEA microtubule organizing center

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163290 Tubgcp6-005 nonsense_mediated_decay Mus_musculus 0 1177
ENSMUST00000041656 Tubgcp6-003 protein_coding Mus_musculus 0 737
ENSMUST00000109353 Tubgcp6-001 protein_coding Mus_musculus 0 737
ENSMUST00000168256 Tubgcp6-007 retained_intron Mus_musculus 0 555
ENSMUST00000166480 Tubgcp6-011 nonsense_mediated_decay Mus_musculus 0 516
ENSMUST00000166994 Tubgcp6-010 retained_intron Mus_musculus 0 390
ENSDART00000122952 TUBGCP6-201 protein_coding Danio_rerio 0 202
ENSMUST00000169208 Tubgcp6-009 retained_intron Mus_musculus 1.99993e-41 174
ENSMUST00000164717 Tubgcp6-006 retained_intron Mus_musculus 2e-32 145

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