C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, gamma complex associated protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109353 Tubgcp6-001 ENSMUSG00000051786 10090 - 15:89098357-89123087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109353 3.463±0.66 6.221±0.99 3.023±1.75 2.942±1.29 3.597±0.94 3.708±1.05 1.928±0.08 2.199±0.53 2.229±0.69 3.808±0.42 2.294±0.37 4.597±1.07 2.296±1.28 1.440±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000098 CIL_000098_0002 CGP 15:89075124-89100340
CIL_000097 CIL_000097_0002 CGP 15:89089084-89123087
CIL_000096 CIL_000096_0002 CGP 15:89098357-89128700

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IEA spindle pole
GO:0005813 IEA centrosome
GO:0007020 IEA microtubule nucleation
GO:0008017 IEA microtubule binding
GO:0008274 IEA gamma-tubulin ring complex
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248846 TUBGCP6-001 protein_coding Homo_sapiens 0 1310
ENST00000425018 TUBGCP6-006 protein_coding Homo_sapiens 0 737
ENST00000439308 TUBGCP6-201 protein_coding Homo_sapiens 0 1308
ENST00000491449 TUBGCP6-003 processed_transcript Homo_sapiens 0 1308
ENST00000498611 TUBGCP6-002 retained_intron Homo_sapiens 0 870

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