C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, gamma complex associated protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128159 TUBGCP6 9606 - 22:50217689-50244992 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000248846 TUBGCP6-001 50217689-50244564 protein_coding
  ENST00000425018 TUBGCP6-006 50217694-50220416 protein_coding
  ENST00000434349 TUBGCP6-007 50226735-50240360 protein_coding
  ENST00000439308 TUBGCP6-201 50217689-50244971 protein_coding
  ENST00000473946 TUBGCP6-004 50222987-50226191 processed_transcript
  ENST00000489511 TUBGCP6-005 50221760-50224592 processed_transcript
  ENST00000491449 TUBGCP6-003 50217694-50226189 processed_transcript
  ENST00000498611 TUBGCP6-002 50217689-50244992 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000248846ENST00000425018ENST00000439308ENST00000473946ENST00000491449ENST00000498611
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000248846 2.191±0.00 N/A N/A 1.348±0.29 0.922±0.24 0.833±0.00 0.734±0.32 N/A N/A 1.592±0.48 0.865±0.00 3.667±0.00 0.825±0.22 1.269±0.00
ENST00000425018 N/A N/A N/A N/A N/A 2.514±0.00 N/A 1.289±0.00 1.343±0.00 5.747±0.00 2.577±0.15 N/A N/A N/A
ENST00000439308 0.798±0.00 N/A N/A N/A N/A N/A 0.927±0.00 N/A 0.690±0.00 N/A 1.237±0.00 3.861±0.20 0.908±0.20 4.351±3.09
ENST00000473946 N/A N/A 1.363±0.00 0.825±0.00 N/A N/A 1.156±0.00 N/A 1.089±0.00 N/A N/A 8.235±0.00 3.626±0.00 16.584±0.00
ENST00000491449 1.377±0.00 5.841±0.00 N/A 2.955±0.00 3.485±0.00 1.310±0.72 N/A 2.682±2.21 0.988±0.00 2.439±0.00 1.248±0.00 8.223±1.41 2.030±0.24 5.579±3.06
ENST00000498611 0.893±0.00 1.642±0.00 N/A 0.509±0.00 0.982±0.00 1.072±0.00 0.555±0.34 N/A 0.674±0.00 0.533±0.00 N/A 1.833±0.00 N/A 1.291±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000097 CIL_000097_0001 CGP 22:50200979-50244992
CIL_000096 CIL_000096_0001 CGP 22:50217689-50251405

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000278 TAS mitotic cell cycle
GO:0000922 IEA spindle pole
GO:0005813 IDA centrosome
GO:0005815 IEA microtubule organizing center
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule
GO:0007020 IDA microtubule nucleation
GO:0008017 IDA microtubule binding
GO:0008274 IDA gamma-tubulin ring complex
GO:0016020 IDA membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089546 TUBGCP6 tubulin, gamma complex associated protein 6 protein_coding Danio_rerio
ENSMUSG00000051786 Tubgcp6 tubulin, gamma complex associated protein 6 protein_coding Mus_musculus

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