C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425095 RPL7P37-001 ENSG00000226646 9606 + 10:35697300-35698037 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000425095
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000425095 0.275±0.00 0.202±0.00 0.033±0.00 0.147±0.00 0.108±0.00 0.030±0.00 0.166±0.00 0.030±0.00 0.093±0.00 0.132±0.00 0.040±0.00 0.134±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q5 CIL_0008Q5_0001 VISTA 10:35336454-35938314
CIL_0008CR CIL_0008CR_0001 VISTA 10:35383964-35987004
CIL_0008Q1 CIL_0008Q1_0001 VISTA 10:35483344-36085363

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 693
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 676
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000149566 Rpl7-003 protein_coding Mus_musculus 0 645
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 512
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 512
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 429
ENSMUST00000125005 Rpl7-004 retained_intron Mus_musculus 0 390
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 230
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 207

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