C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425518 SMARCC1-002 ENSG00000173473 9606 - 3:47587590-47782106 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungMuscleOvaryPlacentaTestisENST00000425518
Transcript ID Bladder Brain Breast Liver Lung Muscle Ovary Placenta Testis
ENST00000425518 2.728±0.00 1.845±0.43 2.858±0.00 3.826±0.00 2.912±0.00 1.046±0.00 17.267±0.00 20.481±0.00 16.648±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000350 CIL_000350_0003 CGP 3:47562239-47782106

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088716 Smarcc1-001 protein_coding Mus_musculus 0 4120

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