C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426171 RP11-415H23.4-001 ENSG00000234907 9606 + 9:132962511-132962667 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000426171
Transcript ID Muscle
ENST00000426171 0.167±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121292 Rpl39l-002 protein_coding Mus_musculus 3e-40 167
ENSMUST00000044103 Rpl39l-001 protein_coding Mus_musculus 3e-40 167
ENSMUST00000117602 Gm15148-001 processed_pseudogene Mus_musculus 4e-34 147
ENSMUST00000115231 Rpl39-001 protein_coding Mus_musculus 1e-33 145
ENSMUST00000142604 Rpl39-ps-002 processed_transcript Mus_musculus 6e-32 139
ENSMUST00000191066 RP23-127L14.1-001 processed_pseudogene Mus_musculus 8e-31 135
ENSMUST00000146505 Rpl39-ps-001 transcribed_processed_pseudogene Mus_musculus 3e-30 134
ENSMUST00000121971 Gm12013-001 processed_pseudogene Mus_musculus 3e-30 134
ENSMUST00000118637 Gm11694-001 processed_pseudogene Mus_musculus 2e-26 121
ENSMUST00000118985 Gm14541-001 processed_pseudogene Mus_musculus 8e-26 119
ENSMUST00000119534 Gm15067-001 processed_pseudogene Mus_musculus 3e-25 117
ENSMUST00000138799 Rpl39-002 retained_intron Mus_musculus 5e-23 110

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