C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein interacting with PRKCA 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426258 PICK1-013 ENSG00000100151 9606 + 22:38057404-38070891 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENST00000426258
Transcript ID Breast Ovary
ENST00000426258 1.210±0.00 1.277±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0001 VISTA 22:37683926-38284300
CIL_0008KJ CIL_0008KJ_0001 VISTA 22:37685616-38286450
CIL_0008BX CIL_0008BX_0001 VISTA 22:37696030-38296592
CIL_0008KA CIL_0008KA_0001 VISTA 22:37698338-38299192
CIL_00082J CIL_00082J_0001 VISTA 22:37733233-38334508
CIL_0008C1 CIL_0008C1_0001 VISTA 22:37746133-38346872
CIL_00082K CIL_00082K_0001 VISTA 22:37750385-38350990
CIL_0008MM CIL_0008MM_0001 VISTA 22:37872841-38473542
CIL_0003QD CIL_0003QD_0001 CGP 22:37970686-38075701
CIL_0003QE CIL_0003QE_0001 CGP 22:38056311-38084093

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165609 Pick1-004 retained_intron Mus_musculus 0 322
ENSMUST00000018295 Pick1-001 protein_coding Mus_musculus 0 267
ENSMUST00000053926 Pick1-003 protein_coding Mus_musculus 0 263
ENSMUST00000169548 Pick1-005 retained_intron Mus_musculus 0 231
ENSMUST00000166417 Pick1-006 processed_transcript Mus_musculus 4.06377e-44 182
ENSMUST00000168513 Pick1-010 processed_transcript Mus_musculus 4e-39 165
ENSMUST00000166155 Pick1-012 protein_coding Mus_musculus 2e-38 163
ENSMUST00000163571 Pick1-002 protein_coding Mus_musculus 2e-38 163
ENSMUST00000171365 Pick1-009 retained_intron Mus_musculus 1e-34 150

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