C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | glypican 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000426280  |
GPC1-007 |
ENSG00000063660 |
9606 | + |
2:240454838-240462484  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007TM | CIL_0007TM_0001 | VISTA | 2:239957940-240560738 |
| CIL_0009AE | CIL_0009AE_0001 | VISTA | 2:240068562-240673577 |
| CIL_0003NP | CIL_0003NP_0001 | CGP | 2:240139026-240468078 |
| CIL_0004UD | CIL_0004UD_0002 | CGP | 2:240435671-240569209 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005578 | IEA | proteinaceous extracellular matrix |
| GO:0005886 | IEA | plasma membrane |
| GO:0016020 | IEA | membrane |
| GO:0031225 | IEA | anchored component of membrane |
| GO:0043395 | IEA | heparan sulfate proteoglycan binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000190586
|
Gpc1-003 | retained_intron | Mus_musculus | 0 | 490 |
|
ENSMUST00000045970
|
Gpc1-001 | protein_coding | Mus_musculus | 0 | 488 |
