C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427191 PTPN13-001 ENSG00000163629 9606 + 4:86594315-86815157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000427191
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000427191 0.401±0.00 2.744±0.00 1.478±0.78 1.204±0.17 0.420±0.03 0.477±0.00 2.927±0.00 3.566±0.00 1.837±0.00 2.014±1.01 0.230±0.10 3.004±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052Z CIL_00052Z_0002 CGP 4:86015123-86815171
CIL_0006J4 CIL_0006J4_0001 CGP 4:86594315-86849263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA:IDA protein tyrosine phosphatase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0006470 TAS:IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0030027 IDA lamellipodium
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048957 Ptpn13-201 protein_coding Mus_musculus 0 2939

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