C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427215 RP11-545A16.3-001 ENSG00000227141 9606 + 1:179586705-179589175 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000427215
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000427215 0.252±0.00 0.059±0.00 0.079±0.00 0.165±0.09 0.199±0.00 0.034±0.03 0.037±0.01 0.418±0.00 0.058±0.00 0.006±0.00 0.042±0.03 1.702±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WB CIL_0001WB_0002 CGP 1:179550539-179691272

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027521 Agap1-001 protein_coding Mus_musculus 0 1807
ENSMUST00000074945 Agap1-003 protein_coding Mus_musculus 0 872
ENSMUST00000190096 Agap1-002 protein_coding Mus_musculus 0 872
ENSMUST00000185417 Agap1-004 retained_intron Mus_musculus 0 246

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