C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428093 AC017083.2-001 ENSG00000236259 9606 + 2:68125265-68125747 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JR CIL_0007JR_0003 UCNEbase 2:66138106-68180953
CIL_0008I2 CIL_0008I2_0001 VISTA 2:67892841-68494859

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 553
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 538
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 536
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 529
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 516
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 505
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 472
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 255
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 243
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 204
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 6e-32 141

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