C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA meiotic recombinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428462 DMC1-201 ENSG00000100206 9606 - 22:38518949-38568409 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastKidneyLiverMuscleOvaryPlacentaENST00000428462
Transcript ID Adipose Adrenal Bladder Breast Kidney Liver Muscle Ovary Placenta
ENST00000428462 0.211±0.00 0.102±0.00 0.021±0.00 0.060±0.04 0.033±0.00 0.034±0.03 0.142±0.00 0.108±0.02 0.063±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DK CIL_0005DK_0001 CGP 22:38483440-38570286
CIL_0005DL CIL_0005DL_0001 CGP 22:38518949-38656629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005694 ISS chromosome
GO:0006200 IEA ATP catabolic process
GO:0006259 IEA DNA metabolic process
GO:0007126 TAS meiotic nuclear division
GO:0007131 IEA reciprocal meiotic recombination
GO:0007283 TAS spermatogenesis
GO:0007292 TAS female gamete generation
GO:0008094 IEA DNA-dependent ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023065 Dmc1-201 protein_coding Mus_musculus 0 760

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