C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428670 ATP2B1-001 ENSG00000070961 9606 - 12:89588072-89708831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000428670
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000428670 1.885±0.00 0.656±0.00 3.907±0.00 2.877±0.00 0.369±0.00 1.772±0.00 1.207±0.00 0.972±0.00 1.254±0.00 2.485±0.00 2.956±0.91 2.628±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0007596 TAS blood coagulation
GO:0008152 IEA metabolic process
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 TAS ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020107 Atp2b1-201 protein_coding Mus_musculus 0 6719
ENSDART00000149585 atp2b1b-005 protein_coding Danio_rerio 0 449
ENSDART00000104353 atp2b1b-001 protein_coding Danio_rerio 0 449
ENSDART00000149641 atp2b1b-003 protein_coding Danio_rerio 5.99756e-43 182
ENSDART00000148570 atp2b1b-004 protein_coding Danio_rerio 7e-32 145

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