C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 56
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429441 RPL7P56-001 ENSG00000231164 9606 + X:136791064-136791780 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungMuscleOvaryENST00000429441
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Muscle Ovary
ENST00000429441 0.064±0.00 0.017±0.00 0.016±0.00 0.032±0.00 0.225±0.00 0.158±0.14 0.030±0.00 0.030±0.00 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PR CIL_0000PR_0002 CGP X:136665547-136880764

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 590
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 573
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 460
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 375
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 375
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 233
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 233

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