C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO-interacting motifs containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429602 SIMC1-202 ENSG00000170085 9606 + 5:176238491-176345445 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000429602
Transcript ID Bladder Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000429602 0.222±0.00 0.959±0.18 0.277±0.00 1.018±0.00 0.522±0.00 1.280±0.00 0.890±0.00 1.911±0.80 0.948±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DK CIL_0002DK_0001 CGP 5:176238367-176361968

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121401 Simc1-001 protein_coding Mus_musculus 0 1652
ENSMUST00000118072 Simc1-002 protein_coding Mus_musculus 0 1419
ENSMUST00000126506 Simc1-007 retained_intron Mus_musculus 0 531
ENSMUST00000150011 Simc1-006 retained_intron Mus_musculus 0 385
ENSMUST00000138869 Simc1-003 nonsense_mediated_decay Mus_musculus 0 383
ENSMUST00000123852 Simc1-005 processed_transcript Mus_musculus 0 296

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