C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polypeptide N-acetylgalactosaminyltransferase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430044 GALNT11-008 ENSG00000178234 9606 + 7:152025693-152122347 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000430044
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000430044 6.721±0.00 3.695±0.00 7.824±0.00 8.815±3.63 7.452±3.93 3.094±2.15 4.249±2.42 28.155±0.00 3.833±0.46 4.491±2.55 2.970±0.00 8.854±6.26 13.913±4.56 4.380±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T7 CIL_0007T7_0001 VISTA 7:151442692-152046426
CIL_0007T1 CIL_0007T1_0001 VISTA 7:151456863-152060019
CIL_00027A CIL_00027A_0001 CGP 7:152025674-152436005

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0004653 IDA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005112 IDA Notch binding
GO:0007220 ISS Notch receptor processing
GO:0007368 ISS determination of left/right symmetry
GO:0008593 ISS regulation of Notch signaling pathway
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0018243 IDA protein O-linked glycosylation via threonine
GO:0030246 IEA carbohydrate binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0060271 ISS cilium morphogenesis
GO:0061314 ISS Notch signaling involved in heart development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045737 Galnt11-001 protein_coding Mus_musculus 0 2006
ENSMUST00000114950 Galnt11-003 protein_coding Mus_musculus 0 1949
ENSMUST00000114952 Galnt11-002 protein_coding Mus_musculus 0 1947

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