C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GATA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430265 GATA2-003 ENSG00000179348 9606 - 3:128480146-128487916 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMusclePlacentaTestisENST00000430265
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000430265 3.562±0.00 6.450±0.00 0.120±0.00 0.578±0.00 1.833±0.00 4.937±0.00 0.079±0.00 3.947±0.00 0.814±0.40 8.811±0.00 4.081±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001158 IDA enhancer sequence-specific DNA binding
GO:0003682 IDA chromatin binding
GO:0003700 IDA:IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IDA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007596 TAS blood coagulation
GO:0008134 IPI transcription factor binding
GO:0008270 IEA zinc ion binding
GO:0035854 IDA eosinophil fate commitment
GO:0043565 IEA sequence-specific DNA binding
GO:0045599 IMP negative regulation of fat cell differentiation
GO:0045746 IDA negative regulation of Notch signaling pathway
GO:0045766 IDA positive regulation of angiogenesis
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0050766 ISS positive regulation of phagocytosis
GO:0070345 IMP negative regulation of fat cell proliferation
GO:0070742 IPI C2H2 zinc finger domain binding
GO:2000178 IDA negative regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015197 Gata2-201 protein_coding Mus_musculus 0 1358
ENSMUST00000170089 Gata2-202 protein_coding Mus_musculus 0 1273
ENSMUST00000121312 Gata4-003 protein_coding Mus_musculus 4e-30 137
ENSMUST00000067417 Gata4-002 protein_coding Mus_musculus 4e-30 137
ENSMUST00000118022 Gata4-001 protein_coding Mus_musculus 4e-30 137

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