C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor (ligand) superfamily, member 13b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430559 TNFSF13B-201 ENSG00000102524 9606 + 13:108269629-108308484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryPlacentaENST00000430559
Transcript ID Adrenal Colon Ovary Placenta
ENST00000430559 0.634±0.00 0.179±0.00 0.154±0.00 0.435±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077K CIL_00077K_0001 CGP 13:108218379-108308484
CIL_00077M CIL_00077M_0001 CGP 13:108251240-109208007

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005125 IEA cytokine activity
GO:0005164 IEA tumor necrosis factor receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005615 IEA extracellular space
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006955 IEA immune response
GO:0007165 TAS signal transduction
GO:0008283 TAS cell proliferation
GO:0008284 TAS positive regulation of cell proliferation
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033892 Tnfsf13b-201 protein_coding Mus_musculus 0 255

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