C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO-interacting motifs containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430704 SIMC1-002 ENSG00000170085 9606 + 5:176238367-176345989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverOvaryPlacentaTestisENST00000430704
Transcript ID Adipose Adrenal Brain Breast Colon Liver Ovary Placenta Testis
ENST00000430704 0.322±0.00 1.542±0.00 1.317±0.00 0.557±0.00 0.453±0.00 0.901±0.00 3.928±1.86 0.786±0.00 12.593±1.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DK CIL_0002DK_0001 CGP 5:176238367-176361968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0032184 IDA SUMO polymer binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118072 Simc1-002 protein_coding Mus_musculus 0 1581
ENSMUST00000121401 Simc1-001 protein_coding Mus_musculus 0 1428
ENSMUST00000126506 Simc1-007 retained_intron Mus_musculus 0 540
ENSMUST00000150011 Simc1-006 retained_intron Mus_musculus 0 385
ENSMUST00000138869 Simc1-003 nonsense_mediated_decay Mus_musculus 0 383

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