C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglycerate kinase 1, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431702 PGK1P2-001 ENSG00000213290 9606 + 19:12559571-12561105 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000431702
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000431702 0.111±0.00 0.171±0.00 0.139±0.00 0.082±0.00 0.025±0.00 0.071±0.00 0.265±0.00 0.046±0.00 0.036±0.02 0.021±0.00 0.176±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091117 Gm5537-201 processed_pseudogene Mus_musculus 0 1341
ENSMUST00000081593 Pgk1-001 protein_coding Mus_musculus 0 1341
ENSMUST00000085735 Pgk1-rs7-201 protein_coding Mus_musculus 0 1341
ENSMUST00000135949 Pgk1-003 nonsense_mediated_decay Mus_musculus 0 935
ENSMUST00000133559 Pgk1-002 retained_intron Mus_musculus 0 464

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