C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglycerate kinase-1, related sequence-7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085735 Pgk1-rs7-201 ENSMUSG00000066632 10090 - 12:10898566-10900296 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085735
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085735 6.548±1.47 0.099±0.04 3.588±2.16 4.934±2.19 5.447±2.53 1.241±0.94 4.770±2.40 5.017±3.91 3.524±4.53 1.054±0.14 1.004±0.36 4.322±3.26 1.621±1.35 0.142±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004618 ISS phosphoglycerate kinase activity
GO:0005524 ISS ATP binding
GO:0005737 IEA cytoplasm
GO:0006096 IEA glycolytic process
GO:0016310 ISS phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304801 PGK2-001 protein_coding Homo_sapiens 0 1212
ENST00000373316 PGK1-001 protein_coding Homo_sapiens 0 2047
ENST00000426382 RP11-516A11.1-001 processed_pseudogene Homo_sapiens 0 1568
ENST00000431702 PGK1P2-001 processed_pseudogene Homo_sapiens 0 1341
ENST00000474281 PGK1-002 processed_transcript Homo_sapiens 0 231
ENST00000476531 PGK1-005 processed_transcript Homo_sapiens 0 433
ENST00000477335 PGK1-003 processed_transcript Homo_sapiens 0 230
ENST00000491291 PGK1-004 processed_transcript Homo_sapiens 0 941

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