C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433031 RP11-1217F2.1-001 ENSG00000235095 9606 - 7:57147986-57150347 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartTestisENST00000433031
Transcript ID Heart Testis
ENST00000433031 0.011±0.00 0.037±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064B CIL_00064B_0004 CGP 7:57119614-57473546

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110142 Gpcpd1-201 protein_coding Mus_musculus 0 2124
ENSMUST00000060955 Gpcpd1-001 protein_coding Mus_musculus 0 2124
ENSMUST00000110136 Gpcpd1-004 protein_coding Mus_musculus 0 1954
ENSMUST00000028822 Gpcpd1-006 protein_coding Mus_musculus 0 1801
ENSMUST00000149854 Gpcpd1-003 nonsense_mediated_decay Mus_musculus 0 1764
ENSMUST00000145694 Gpcpd1-002 nonsense_mediated_decay Mus_musculus 0 1576
ENSMUST00000148833 Gpcpd1-005 nonsense_mediated_decay Mus_musculus 0 1576
ENSMUST00000127712 Gpcpd1-007 retained_intron Mus_musculus 0 815
ENSMUST00000124107 Gpcpd1-010 protein_coding Mus_musculus 0 619
ENSMUST00000110135 Gpcpd1-011 protein_coding Mus_musculus 0 549
ENSMUST00000124632 Gpcpd1-012 nonsense_mediated_decay Mus_musculus 0 492
ENSMUST00000140867 Gpcpd1-009 processed_transcript Mus_musculus 0 237
ENSMUST00000131617 Gpcpd1-008 processed_transcript Mus_musculus 0.0000000000006 81

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