C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 13 (sodium-dependent citrate transporter), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433363 SLC13A5-001 ENSG00000141485 9606 - 17:6684713-6713567 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverOvaryTestisENST00000433363
Transcript ID Brain Kidney Liver Ovary Testis
ENST00000433363 1.107±0.00 22.573±0.00 42.402±0.00 0.861±0.00 0.938±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HE CIL_0000HE_0001 CGP 17:6684713-6775647

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005343 IEA organic acid:sodium symporter activity
GO:0005886 TAS plasma membrane
GO:0006814 IEA sodium ion transport
GO:0006842 IEA tricarboxylic acid transport
GO:0015137 IEA citrate transmembrane transporter activity
GO:0015141 IEA succinate transmembrane transporter activity
GO:0015142 IEA tricarboxylic acid transmembrane transporter activity
GO:0015744 IEA succinate transport
GO:0015746 IEA citrate transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0017153 IEA sodium:dicarboxylate symporter activity
GO:0035674 IEA tricarboxylic acid transmembrane transport
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021161 Slc13a5-001 protein_coding Mus_musculus 0 1306
ENSMUST00000137701 Slc13a5-002 protein_coding Mus_musculus 0 322
ENSMUST00000140167 Slc13a5-003 protein_coding Mus_musculus 0 219

Loading