C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433655 CTSD-006 ENSG00000117984 9606 - 11:1752775-1763901 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverLungMuscleOvaryPlacentaTestisENST00000433655
Transcript ID Adrenal Brain Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000433655 62.328±0.00 34.513±0.00 129.877±0.00 135.978±0.00 131.713±0.00 245.837±0.00 140.256±47.57 113.939±0.00 28.883±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0001 VISTA 11:1663842-2266142
CIL_0007RG CIL_0007RG_0001 VISTA 11:1668349-2271510
CIL_00097V CIL_00097V_0001 VISTA 11:1688064-2293510
CIL_00048D CIL_00048D_0001 CGP 11:1732410-1759051
CIL_00048K CIL_00048K_0001 CGP 11:1752752-1837521

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0006508 IEA proteolysis

Homologs

No Homologs available.

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