C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 2, (m/II) large subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433674 CAPN2-201 ENSG00000162909 9606 + 1:223701593-223776016 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungPlacentaENST00000433674
Transcript ID Kidney Lung Placenta
ENST00000433674 2.700±0.00 5.590±0.00 5.348±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IEA:ISS calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 ISS cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006508 IEA:ISS proteolysis
GO:0008092 NAS cytoskeletal protein binding
GO:0008234 TAS cysteine-type peptidase activity
GO:0030425 ISS dendrite
GO:0030864 TAS cortical actin cytoskeleton
GO:0031143 IDA pseudopodium
GO:0045121 IDA membrane raft
GO:0051493 IEA:TAS regulation of cytoskeleton organization
GO:0051603 IC proteolysis involved in cellular protein catabolic process
GO:0070062 IDA extracellular vesicular exosome
GO:0071230 ISS cellular response to amino acid stimulus
GO:0097038 IDA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068505 Capn2-201 protein_coding Mus_musculus 0 2326
ENSDART00000044085 CAPN2 (3 of 4)-201 protein_coding Danio_rerio 0 392
ENSMUST00000168514 Capn8-202 protein_coding Mus_musculus 0 390
ENSMUST00000048941 Capn8-201 protein_coding Mus_musculus 0 390
ENSDART00000130493 capn2b-002 protein_coding Danio_rerio 0 307
ENSDART00000077958 capn2b-001 protein_coding Danio_rerio 0 307
ENSDART00000105101 capn2b-201 protein_coding Danio_rerio 0 287
ENSDART00000105099 capn1b-001 protein_coding Danio_rerio 0 196

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