C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433853 RP11-778D9.4-001 ENSG00000228205 9606 + 3:184149704-184150435 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000433853
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000433853 0.175±0.00 0.470±0.00 0.098±0.00 0.101±0.00 0.197±0.00 0.444±0.00 0.087±0.00 0.144±0.00 0.118±0.00 0.186±0.00 2.309±1.75 1.846±1.75 0.397±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0001 CGP 3:184135038-184684758

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032998 Rps3-001 protein_coding Mus_musculus 0 865
ENSMUST00000107096 Rps3-003 protein_coding Mus_musculus 0 573
ENSMUST00000128174 Rps3-004 retained_intron Mus_musculus 0 390
ENSMUST00000128725 Rps3-002 retained_intron Mus_musculus 0 375

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