C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128725 Rps3-002 ENSMUSG00000030744 10090 - 7:99478893-99483650 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0002 VISTA 7:99059661-99661402
CIL_0008I3 CIL_0008I3_0002 VISTA 7:99464975-100069320

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278572 RPS3-014 protein_coding Homo_sapiens 0 333
ENST00000407940 RP11-69L16.5-001 processed_pseudogene Homo_sapiens 0 372
ENST00000422465 RPS3-013 protein_coding Homo_sapiens 0 274
ENST00000433853 RP11-778D9.4-001 processed_pseudogene Homo_sapiens 0 375
ENST00000456781 RPS3P1-001 processed_pseudogene Homo_sapiens 5e-34 147
ENST00000460061 SPOCD1-004 retained_intron Homo_sapiens 0.000001 60
ENST00000468720 SPOCD1-006 retained_intron Homo_sapiens 0.000001 60
ENST00000485944 SPOCD1-002 retained_intron Homo_sapiens 0.000001 60
ENST00000524851 RPS3-022 protein_coding Homo_sapiens 0 442
ENST00000525690 RPS3-023 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000525933 RPS3-008 protein_coding Homo_sapiens 0 292
ENST00000526248 RPS3-025 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000526608 RPS3-021 protein_coding Homo_sapiens 0 318
ENST00000527273 RPS3-020 protein_coding Homo_sapiens 0 298
ENST00000527446 RPS3-004 protein_coding Homo_sapiens 0 453
ENST00000528439 RPS3-010 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000528847 RPS3-019 protein_coding Homo_sapiens 0 398
ENST00000529173 RPS3-005 retained_intron Homo_sapiens 0 353
ENST00000529285 RPS3-017 processed_transcript Homo_sapiens 0 398
ENST00000530164 RPS3-007 protein_coding Homo_sapiens 0 510
ENST00000530170 RPS3-024 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000530721 RPS3-012 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000531188 RPS3-001 protein_coding Homo_sapiens 0 475
ENST00000532872 RPS3-015 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000534440 RPS3-016 protein_coding Homo_sapiens 0 364
ENST00000534555 RPS3-018 processed_transcript Homo_sapiens 0 267

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