C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like (endophilin) interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435165 SGIP1-004 ENSG00000118473 9606 + 1:66694694-66745084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastHeartKidneyLungOvaryTestisENST00000435165
Transcript ID Adrenal Bladder Breast Heart Kidney Lung Ovary Testis
ENST00000435165 0.312±0.00 0.495±0.00 1.027±0.00 0.391±0.00 0.295±0.18 0.824±0.00 0.253±0.15 0.768±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NS CIL_0002NS_0001 CGP 1:65792514-66748299
CIL_000262 CIL_000262_0001 CGP 1:66533383-66778787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030131 IEA clathrin adaptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106882 Sgip1-007 protein_coding Mus_musculus 0 2023
ENSMUST00000066824 Sgip1-001 protein_coding Mus_musculus 0 2023
ENSMUST00000072481 Sgip1-006 protein_coding Mus_musculus 0 1917
ENSMUST00000080728 Sgip1-004 protein_coding Mus_musculus 0 1890
ENSMUST00000149547 Sgip1-005 protein_coding Mus_musculus 0 1633
ENSMUST00000140676 Sgip1-015 processed_transcript Mus_musculus 0 780
ENSDART00000051271 fcho2-201 protein_coding Danio_rerio 0.000000000004 79
ENSDART00000139673 fcho2-001 protein_coding Danio_rerio 0.000000000004 79
ENSDART00000141218 fcho2-002 protein_coding Danio_rerio 0.000000000004 79

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